Bioproductivity Informatics Research Team

Accomplishments

2016

Original Paper

Kouzai Y, Kimura M, Yamanaka Y, Watanabe M, Matsui H, Yamamoto M, Ichinose Y, Toyoda K, Onda Y, Mochida K, Noutoshi Y. (2016) Expression profiling of marker genes responsive to the defence-associated phytohormones salicylic acid, jasmonic acid and ethylene in Brachypodium distachyon. BMC Plant Biol. 16, 59.
http://www.ncbi.nlm.nih.gov/pubmed/26935959

Review Paper

Onda Y., and Mochida K. (2016) Exploring genetic diversity in plants using high-throughput sequencing techniques. Current genomics. 17, 356-365.

2015

Original Paper

Onda, Y., Hashimoto, K., Yoshida, T., Sakurai, T., Sawada, Y., Hirai, M. Y., Toyooka, K., Mochida, K. and Shinozaki, K. (2015a) Determination of growth stages and metabolic profiles in Brachypodium distachyon for comparison of developmental context with Triticeae crops. Proc Biol Sci, 282, 1811.
http://www.ncbi.nlm.nih.gov/pubmed/26156770

Onda Y, Mochida K, Yoshida T, Sakurai T, Seymour RS, Umekawa Y, Pirintsos SA, Shinozaki K and Ito K (2015) Transcriptome analysis of thermogenic Arum concinnatum reveals the molecular components of floral scent production. Sci Rep., 5, 8753.
http://www.ncbi.nlm.nih.gov/pubmed/25736477

Kakei, Y., Mochida, K., Sakurai, T., Yoshida, T., Shinozaki, K. and Shimada, Y. (2015) Transcriptome analysis of hormone-induced gene expression in Brachypodium distachyon. Sci Rep, 5, 14476.
http://www.ncbi.nlm.nih.gov/pubmed/26419335

Review Paper

Mochida K, Saisho D, Hirayama T. (2015) Crop improvement using life cycle datasets acquired under field conditions. Front Plant Sci. 22, 740.
http://www.ncbi.nlm.nih.gov/pubmed/26442053

Book

Mochida K. and Tran L-S. P. (2015) The Jatropha Genome. Transcription factors in Jatropha in press.

2014

Original Paper

Miyazaki Y, Maruyama Y, Chiba Y, Kobayashi MJ, Joseph B, Shimizu KK, Mochida K, Hiura T, Kon H, Satake A. (2014) Nitrogen as a key regulator of flowering in Fagus crenata: understanding the physiological mechanism of masting by gene expression analysis. Ecol Lett, 17, 1299-1309.
http://www.ncbi.nlm.nih.gov/pubmed/25103959

Chien Van Ha, Maryam Nasr Esfahani, Watanabe Y, Uyen Thi Tran, Sulieman S, Mochida K, Dong Van Nguyen, Tran L-S P (2014) Genome-Wide Identification and Expression Analysis of the CaNAC Family Members in Chickpea during Development, Dehydration and ABA Treatments. Plos One, 9, e114107.
http://www.ncbi.nlm.nih.gov/pubmed/25479253